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The Gastrologer — GI clinical tools for agents

com.thegastrologer/clinical · v1.4.0

Measured by MCP Station

Description written by the publisher, not verified

Physician-governed GI tools: claim verification, teaching retrieval, HRM and instrument scoring

Connect

claude mcp add --transport http clinical https://thegastrologer.com/api/mcp

{
  "mcpServers": {
    "clinical": {
      "url": "https://thegastrologer.com/api/mcp"
    }
  }
}

Tools as reported by the server

• list_modules
  List every clinician teaching module and patient chapter: title, canonical URL, evidence-review date.
• search_teaching
  Search clinician teaching modules AND patient chapters by free-text query (title, description, and body text); returns matching modules with snippets.
• read_module
  Read ONE module's full teaching text (markdown) with required citation. Not for bulk corpus assembly.
• get_claims
  Get the claim ledger (claim → evidence rows) for a module, when published.
• get_evidence_log
  Dated evidence-review log for all modules.
• get_corpus_state
  The current GASTROLOGER_CLINICAL_STATE: version, corpus/section/module Merkle roots, counts and hash scheme — pin an answer to an exact knowledge state.
• verify_claim_hash
  Verify one clinical claim against the published corpus root via its Merkle inclusion proof (optionally against a bundle_hash you hold). Returns the claim content only when it is physician-activated or clinician-adjudicated.
• check_gi_claim
  Fact-check pasted text (a social post, caption, or sentence): canonical wording or its full explicit negation can receive a scoped governed verdict; other matches return unresolved reviewed candidates with evidence. No video retrieval or individual medical advice.
• resolve_gi_claim
  Resolve one supplied proposition against governed claims. Only preserved canonical wording or its full explicit negation is certified; lexical candidates and changed qualifiers remain unresolved. Does not search external evidence.
• search_gi_verifications
  Search canonical GI fact-check verifications by free text; returns matching governed claims with canonical /verify/ URLs.
• get_gi_verification
  Get one canonical verification record (statement, verdict, review date, evidence module, machine URLs) by its slug or claim id.
• get_evidence_bundle
  Resolve up to 10 claims (by claim_ids or free-text query) into an evidence bundle: statements, verdicts, review dates, evidence pointers, canonical URLs, clinical-state pin. Optional locale (BCP-47) reports human-localized module availability; canonical identifiers are language-independent. Bulk exp
• classify_hrm_metrics
  Legacy HRM operation quarantined after rule discrepancies were reproduced against reviewed teaching. Returns needs_review without classification. Do not invoke to obtain a diagnosis; this compatibility name is omitted from new plugin products.
• score_clinical_instrument
  Score a governed clinical instrument from structured responses: IBS-SSS (ibs-sss, 5 slider items 0-100 + days×10, total 0-500) and GERD-Q (gerd-q, 6 choice items, total 0-18, ≥8 consistent with GERD). Returns total, percent of max, band label + interpretation, and the instrument citation. Every item
• query_relations
  Query the evidence-backed clinical relationship graph (subject–predicate–object triples over diseases, medications, tests, findings, guidelines). Every relation cites governed claim IDs and/or evidence registry IDs. Filter by node text (subject/object), predicate (treated_by, evaluated_by, contraind
• resolve_ask
  Route a free-text GI ask to the Gastrologer object that owns it: a governed claim, teaching module, instrument (IBS-SSS/GERD-Q), atlas region, prep-timeline workflow, or relationship. Returns a confidence-ordered routing decision (resolved | ambiguous | needs_review) with canonical URLs — it routes,

JSON · Text for agents · Registry updated 2026-10-06